BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022C03LP1|AL427873
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1522 1569 0.0
>3x_Contig1522
Length = 7810
Score = 1569 bits (789), Expect = 0.0
Identities = 807/814 (99%), Gaps = 1/814 (0%)
Strand = Plus / Minus
Query: 3 ctccttattgagtaataaagatgtcttgaacagcttagaaaacctaagagaaataaaaat 62
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7240 ctccttattgagttataaagatgtcttgaacagcttagaaaacctaagagaaataaaaat 7181
Query: 63 gagtgttgtaagcagtaatgagctaataaaaaagtctcctcaatggggaaactggcaaag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7180 gagtgttgtaagcagtaatgagctaataaaaaagtctcctcaatggggaaactggcaaag 7121
Query: 123 ggagttgtccaaaatttcatccaagacacaggaatggaaaatcgtcgatggagggcacca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7120 ggagttgtccaaaatttcatccaagacacaggaatggaaaatcgtcgatggagggcacca 7061
Query: 183 aatctacaagtatgggcttggaaagcagcaagcacaggacgtccttttgagattgattgg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7060 aatctacaagtatgggcttggaaagcagcaagcacaggacgtccttttgagattgattgg 7001
Query: 243 tgagaaagacagatactaaatgagaaacatatgtaacatcttaagtaatgtactcctctt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7000 tgagaaagacagatactaaatgagaaacatatgtaacatcttaagtaatgtactcctctt 6941
Query: 303 ttctaacataccagttttacttcccattacaaaccgctttaggtacatttataccatcac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6940 ttctaacataccagttttacttcccattacaaaccgctttaggtacatttataccatcac 6881
Query: 363 aatcaccgacgaggactacgttgtaagaaaaaaaaatacggaaaatactgaaagaattga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6880 aatcaccgacgaggactacgttgtaagaaaaaaaaatacggaaaatactgaaagaattga 6821
Query: 423 atatatatatatatntbtbactatgatatatatgtkctttaagattaataactttcagaa 482
|||||||||||||| | | |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6820 atatatatatatatatatgactatgatatatatgtgctttaagattaataactttcagaa 6761
Query: 483 catctgaaactggcctgttcagttgagcatgcgaatatcgccatcgacgtcgttacagta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6760 catctgaaactggcctgttcagttgagcatgcgaatatcgccatcgacgtcgttacagta 6701
Query: 543 ttcgtcttcctgttctggtattggtggatgtgttattctgctatctctgttcatactcgg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6700 ttcgtcttcctgttctggtattggtggatgtgttattctgctatctctgttcatactcgg 6641
Query: 603 aaagaaagatgtgccctcatcattgattggggatagtctcgacctggtatcaagagtctc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6640 aaagaaagatgtgccctcatcattgattggggatagtctcgacctggtatcaagagtctc 6581
Query: 663 gttcggtgaataaacatcttcatctacaaattcctcatcttcatcttcatcgtcactatc 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6580 gttcggtgaataaacatcttcatctacaaattcctcatcttcatcttcatcgtcactatc 6521
Query: 723 caagtcggcctctaaatcacaaactgctctgc-rttaggacaaacaaattgaggatatgt 781
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 6520 caagtcggcctctaaatcacaaactgctctgcagttaggacaaacaaattgaggatatgt 6461
Query: 782 ttttgatacaagttgtctaatgcacttgaaatgc 815
||||||||||||||||||||||||||||||||||
Sbjct: 6460 ttttgatacaagttgtctaatgcacttgaaatgc 6427
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,873
Number of Sequences: 1807
Number of extensions: 10873
Number of successful extensions: 194
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)